Publications of A.
Select a view.192 publication entries, 107 of them (printed in bold in the list) acknowledge the project support.
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Paper (reviewed)
| Antolik and Bednar 2011 | Antolik, J. and Bednar, J.A. | Development of maps of simple and complex cells in the primary visual cortex | Front. Comput. Neurosci. (2011) 5:17 doi:10.3389/fncom.2011.00017 |
abstract, fulltext |
| Antolik and Davison 2013 | Antolik, J. and Davison, A.P. | Integrated workflows for spiking neuronal network simulations | Front. Neuroinform. (2013) 7:34 doi:10.3389/fninf.2013.00034 |
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| Auffarth et al. 2011 | Auffarth, B., Kaplan, B. and Lansner, A. | Map formation in the olfactory bulb by axon guidance of olfactory neurons | Front Syst Neurosci (2011) 5:84 doi:10.3389/fnsys.2011.00084 |
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| Bazhenov et al. 2011 | Bazhenov, M., Lonjers, P., Skorheim, S., Bedard, C. and Destexhe, A. | Non-homogeneous extracellular resistivity affects the current-source density profiles of up/down state oscillations | Phil. Trans. R. Soc. A (2011) 369:3802-3819 doi:10.1098/rsta.2011.0119 |
abstract, fulltext |
| Bedard and Destexhe 2011 | Bedard, C. and Destexhe, A. | Generalized theory for current-source-density analysis in brain tissue | Phys. Rev. E (2011) 84:041909 doi:10.1103/PhysRevE.84.041909 |
abstract |
| Bedard and Destexhe 2013 | Bedard, C. and Destexhe, A. | Generalized cable theory for neurons in complex and heterogeneous media | PHYSICAL REVIEW E (2013) 88: 022709 doi:10.1103/PhysRevE.88.022709 |
abstract, fulltext |
| Bedard and Destexhe 2014b | Bedard, C. and Destexhe, A. | Mean-field formulation of Maxwell equations to model electrically inhomogeneous and isotropic media | Journal of Electromagnetic Analysis and Applications (2014) 6: 296-302 doi:10.4236/jemaa.2014.610029 |
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| Bedard and Destexhe 2014c | Bedard, C. and Destexhe, A. | Generalized cable formalism to calculate the magnetic field of single neurons and neuronal populations | Physical Review E (2014) 90(4): 042723 doi:10.1103/PhysRevE.90.042723 |
abstract |
| Bedard et al. 2011 | Bédard, C., Béhuret, S., Deleuze, C., Bal, T. and Destexhe, A. | Oversampling method to extract excitatory and inhibitory conductances from single-trial membrane potential recordings | J Neurosci Meth (2012) 210 (1): 3 - 14 doi:10.1016/j.jneumeth.2011.09.010 |
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| Benjaminsson and Lansner 2012 | Benjaminsson, S. and Lansner, A. | Nexa: A scalable neural simulator with integrated analysis | Network: Computation in Neural Systems (2012) 23: 254-271 doi:10.3109/0954898X.2012.737087 |
abstract, fulltext |
| Berthet and Lansner 2014 | Berthet, P. and Lansner, A. | Optogenetic Stimulation in a Computational Model of the Basal Ganglia Biases Action Selection and Reward Prediction Error | PLoS ONE (2014) 9(3): e90578 doi:10.1371/journal.pone.0090578 |
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| Berthet et al. 2012 | Berthet, P., Hellgren-Kotaleski, J. and Lansner, A. | Action selection performance of a reconfigurable Basal Ganglia model with a Hebbian-Bayesian Go-NoGo connectivity | Front. Behav. Neurosci. (2012) 6:65 doi:10.3389/fnbeh.2012.00065 |
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| Bezgin et al. 2012 | Bezgin, G., Vakorin, V. A., van Opstal, A. J., McIntosh, A. R. and Bakker, R. | Hundreds of brain maps in one atlas: Registering coordinate-independent primate neuro-anatomical data to a standard brain | NeuroImage (2012) 62(1): 67-76 doi:10.1016/j.neuroimage.2012.04.013 |
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| Blackman et al 2014 | A. V. Blackman, S. Grabuschnig, R. Legenstein, and P. J. Sjöström | A comparison of manual neuronal reconstruction from biocytin histology or 2-photon imaging: morphometry and computer modeling | Frontiers in neuroanatomy (2014) : 8 doi:10.3389/fnana.2014.00065 |
abstract, fulltext |
| Bogadhi et al. 2013 | Bogadhi, A., Montagnini, A. and Masson, G.S. | Dynamical interaction between retinal and extra-retinal signals in motion integration for smooth pursuit | Journal of Vision (2013) 13(13): 5 doi:10.1167/13.13.5 |
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| Bopp et al. 2014 | Bopp, R., Maçarico da Costa, N., Kampa, B.M., Martin, K.A. and Roth M.M. | Pyramidal cells make specific connections onto smooth (GABAergic) neurons in mouse visual cortex | PLoS Biol. (2014) 12(8):e1001932 doi:10.1371/journal.pbio.1001932 |
abstract, fulltext |
| Brüderle et al. 2011 | Brüderle, D., Petrovici, M. A., Vogginger, B., Ehrlich, M., Pfeil, T., Millner, S., Grübl, A., Wendt, K., Müller, E., Schwartz, M.-O., de Oliveira, D. H., Jeltsch, S., Fieres, J., Schilling, M., Müller, P., Breitwieser, O., Petkov, V., Muller, L., Davison, A. P., Krishnamurthy, P., Kremkow, J., Lundqvist, M., Muller, E., Partzsch, J., Scholze, S., Zühl, L., Mayr, C., Destexhe, A., Diesmann, M., Potjans, T. C., Lansner, A., Schüffny, R., Schemmel, J. and Meier, K. | A comprehensive workflow for general-purpose neural modeling with highly configurable neuromorphic hardware systems | Biological Cybernetics (2011) 104(4-5): 263-296 doi:10.1007/s00422-011-0435-9 |
abstract, fulltext |
| Chapuis and Tetzlaff 2014 | Chapuis, A. and Tetzlaff, T. | The variability of tidewater-glacier calving: origin of event-size and interval distributions | Journal of Glaciology (2014) 60 (222): 622-634 doi:10.3189/2014JoG13J215 |
abstract |
| Chicharro and Ledberg 2012 | Chicharro, D. and Ledberg, A. | When two become one: the limits of causality analysis of brain dynamics | PLoS One (2012) 7(3):e32466 doi:10.1371/journal.pone.0032466 |
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| Dagnino et al. 2015 | Dagnino, B., Gariel-Mathis, M.-A. and Roelfsema, P. R. | Microstimulation of area V4 has little effect on spatial attention and on the perception of phosphenes evoked in area V1 | Journal of Neurophysiology (2015) 113(3): 730-739 doi:10.1152/jn.00645.2014 |
abstract |
| Davison 2012 | Davison, A. P. | Automated Capture of Experiment Context for Easier Reproducibility in Computational Research | Computing in Science and Engineering (2012) 14: 48-56 doi:10.1109/MCSE.2012.41 |
abstract, fulltext |
| Deco at al. 2014b | Deco, G., McIntosh, A.R., Shen, K., Hutchison, R.M., Menon, R.S., Everling, S., Hagmann, P. and Jirsa, V.K. | Identification of Optimal Structural Connectivity Using Functional Connectivity and Neural Modeling | The Journal of Neuroscience (2014) 34(23): 7910-7916 doi:10.1523/JNEUROSCI.4423-13.2014 |
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| Deco et al. 2013 | Deco,G., Ponce-Alvarez, A., Mantini, D., Romani, G.L., Hagmann, P. and Corbetta, M. | Resting-state functional connectivity emerges from structurally and dynamically shaped slow linear fluctuations | J. Neurosci. (2013) 33: 11239-11252 doi:10.1523/JNEUROSCI.1091-13.2013 |
abstract, (fulltext) |
| Deco et al. 2014 | Deco, G., Ponce-Alvarez, A., Hagmann, P., Romani, G.L., Mantini, D. and Corbetta, M. | How local excitation-inhibition ratio impacts the whole brain dynamics | J. Neurosci. (2014) 34: 7886-7898 doi:10.1523/JNEUROSCI.5068-13.2014 |
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| DeFelipe et al. 2013 | DeFelipe, J., Lopez-Cruz, P.L., Benavides-Piccione, R., Bielza, C., Larranaga, P., Anderson, S., Burkhalter, A., Cauli, B., Fairen, A., Feldmeyer, D., Fishell, G., Fitzpatrick, D., Freund, T.F., Gonzalez-Burgos, G., Hestrin, S., Hill, S., Hof, P.R., Huang, J., Jones, E.G., Kawaguchi, Y., Kisvarday, Z., Kubota, Y., Lewis, D.A., Marin, O., Markram, H., McBain, C.J., Meyer, H.S., Monyer, H., Nelson, S.B., Rockland, K., Rossier, J., Rubenstein, J.L.R., Rudy, B., Scanziani, M., Shepherd, G.M., Sherwood, C.C., Staiger, J.F., Tamas, G., Thomson, A., Wang, Y., Yuste, R. and Ascoli, G.A. | New insights into the classification and nomenclature of cortical GABAergic interneurons | Nature Reviews Neuroscience (2013) 14: 202-216 doi:10.1038/nrn3444 |
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| Dehghani et al. 2012 | Dehghani, N., Hatsopoulos, N.G., Haga, Z.D., Parker, R.A., Greger, B., Halgren, E., Cash, S.S., and Destexhe, A. | Avalanche analysis from multielectrode ensemble recordings in cat, monkey, and human cerebral cortex during wakefulness and sleep | Frontiers in Physiology (2012) 3: 302 doi:10.3389/fphys.2012.00302 |
abstract, fulltext |
| Deneux et al. 2012b | Deneux, T., Takerkart, S., Grinvald, A., Masson, G.S. and Vanzetta, I. | A processing work-flow for measuring erythrocytes velocity in extended vascular networks from wide field high-resolution optical imaging data. | Neuroimage (2012) 59: 2569-2588 doi:10.1016/j.neuroimage.2011.08.081 |
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| Denker et al. 2011c | Denker, M., Roux, S., Lindén, H., Diesmann, M., Riehle, A. and Grün, S. | The local field potential reflects surplus spike synchrony | Cerebral Cortex (2011) 21:2681-2695 doi:10.1093/cercor/bhr040 |
abstract, fulltext |
| Destexhe and Bedard 2012 | Destexhe, A. and Bedard, C. | Do neurons generate monopolar current sources? | AJP - JN Physiol (2012) 108(4): 953-955 doi:10.1152/jn.00357.2012 |
abstract, (fulltext) |
| Devor et al. 2013 | Devor, A., Bandettini, P., Boas, D., Bower, J., Buxton, R., Cohen, L., Dale, A., Einevoll, G., Fox, P., Franceschini, M., Friston, K., Fujimoto, J., Geyer, M., Greenberg, J., Halgren, E., Hamalainen, M., Helmchen, F., Hyman, B., Jasanoff, A., Jernigan, T., Judd, L., Kim, S.-G., Kleinfeld, D., Kopell, N., Kutas, M., Kwong, K., Larkum, M., Lo, E., Magistretti, P., Mandeville, J., Masliah, E., Mitra, P., Mobley, W., Moskowitz, M., Nimmerjahn, A., Reynolds, J., Rosen, B., Salzberg, B., Schaffer, C., Silva, G., So, P., Spitzer, N., Tootell, R., Essen, D. V., Vanduffel, W., Vinogradov, S., Wald, L., Wang, L., Weber, B. and Yodh, A. | The challenge of connecting the dots in the B.R.A.I.N. | Neuron (2013) 80: 270-274 doi:10.1016/j.neuron.2013.09.008 |
abstract |
| Djurfeldt et al. 2014 | Djurfeldt, M., Davison, A.P. and Eppler, J.M. | Efficient generation of connectivity in neuronal networks from simulator-independent descriptions | Front. Neuroinform. (2014) 8:43 doi:10.3389/fninf.2014.00043 |
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| El Boustani et al. 2012 | El Boustani, S., Yger, P., Frégnac, Y. and Destexhe, A. | Stable Learning in Stochastic Network States | The Journal of Neuroscience (2012) 32(1): 194-214 doi:10.1523/JNEUROSCI.2496-11.2012 |
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| Estebanez et al. 2012 | Estebanez, L., Boustani, S. E., Destexhe, A. and Shulz, D. E. | Correlated input reveals coexisting coding schemes in a sensory cortex | Nature Neuroscience (2012) 15: 1691-1699 doi:10.1038/nn.3258 |
abstract, (fulltext) |
| Fiebig and Lansner 2014 | Fiebig F. and Lansner A. | Memory Consolidation from Seconds to Weeks: A Three-Stage Neural Network Model with Autonomous Reinstatement Dynamics | Front Comput Neurosci (2014) 8: 64 doi:10.3389/fncom.2014.00064 |
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| Friston et al. 2012 | Friston, K., Adams, R. A., Perrinet, L. and Breakspear, M. | Perceptions as hypotheses: saccades as experiments | Front. Psychology (2012) 3:151 doi:10.3389/fpsyg.2012.00151 |
abstract, fulltext |
| Garcia et al. 2014 | Garcia, S., Guarino, D., Jaillet, F., Jennings, T.R., Pröpper, R., Rautenberg, P.L., Rodgers, C., Sobolev, A., Wachtler, T., Yger, P. and Davison, A.P. | Neo: an object model for handling electrophysiology data in multiple formats | Front. Neuroinform. (2014) 8:10 doi:10.3389/fninf.2014.00010 |
abstract, fulltext |
| Gomez-Gonzales et al 2014 | Gomez-Gonzales, J.F., Destexhe, A. and Bal, T. | Application of active electrode compensation to perform continuous voltage-clamp recordings with sharp microelectrodes | J. Neural Engineering (2014) 11:056028 doi:10.1088/1741-2560/11/5/056028 |
abstract |
| Grassia et al. 2011 | Grassia, F., Buhry, L., Levi, T., Tomas, J., Destexhe, A. and Saaghi, S. | Tunable neuromimetic integrated system for emulating cortical neuron models | Front. Neurosci. (2011) 5:134 doi:10.3389/fnins.2011.00134 |
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| Hagen et al. 2015b | Hagen, E., Ness, T.V., Khosrowshahi, A., Sørensen, C., Fyhn, M., Hafting, T., Franke, F. and Einevoll, GT. | ViSAPy: A Python tool for biophysics-based generation of virtual spiking activity for evaluation of spike-sorting algorithms | Journal of Neuroscience Methods (2015) 245: 182-204 doi:10.1016/j.jneumeth.2015.01.029 |
abstract, fulltext |
| Hansen et al. 2015 | Hansen, E.C.A, Battaglia, D., Spiegler, A., Deco, G. and Jirsa, V.K. | Functional connectivity dynamics: Modeling the switching behavior of the resting state | NeuroImage (2015) 105: 525-535 doi:10.1016/j.neuroimage.2014.11.001 |
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| Hanuschkin et al. | Hanuschkin, A., Diesmann M., and Morrison, A. | A reafferent and feed-forward model of song syntax generation in the Bengalese finch | J Comput Neurosci. (2011) 31(3):509-32 doi:10.1007/s10827-011-0318-z |
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| Helias et al. 2012 | Helias, M., Kunkel, S., Masumoto, G., Igarashi, J., Eppler, J. M., Ishii, S., Fukai, T., Morrison, A. and Diesmann, M. | Supercomputers ready for use as discovery machines for neuroscience | Front. Neuroinform. (2012) 6:26 doi:10.3389/fninf.2012.00026 |
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| Indiveri et al. 2011 | Indiveri, G., Linares-Barranco, B., Hamilton, T. J., van Schaik, A., Etienne-Cummings, R., Delbruck, T., Liu, S.-C., Dudek, P., Häfliger, P., Renaud, S., Schemmel, J., Cauwenberghs, G., Arthur, J., Hynna, K., Folowosele, F., Saïghi, S., Serrano-Gotarredona, T., Wijekoon, J., Wang, Y. and Boahen, K. | Neuromorphic silicon neuron circuits | Front. Neurosci. (2011) 5:73 doi:10.3389/fnins.2011.00073 |
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| Insabato et al. 2014 | Insabato, A., Dempere-Marco, L., Pannunzi, M., Deco, G. and Romo, R. | The influence of spatio-temporal structure of noisy stimuli in decision-making | PLoS Comput. Biol. (2014) 10: e1003492 doi:10.1371/journal.pcbi.1003492 |
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| Kaplan and Lansner 2014 | Kaplan, B.A. and Lansner, A. | A spiking neural network model of self-organized pattern recognition in the early mammalian olfactory system | Front. Neural Circuits (2014) 8:5 doi:10.3389/fncir.2014.00005 |
abstract |
| Kaplan et al. 2013 | Kaplan, B.A., Lansner, A., Masson, G.S. and Perrinet, L.U. | Anisotropic connectivity implements motion-based prediction in a spiking neural network | Front. Comput. Neurosci. (2013) 7:112 doi:10.3389/fncom.2013.00112 |
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| Kaplan Khoei et al 2014 | Kaplan, B.A., Khoei, M.A., Lansner, A. and Perrinet, L.U. | Signature of an anticipatory response in area V1 as modeled by a probabilistic model and a spiking neural network | International Joint Conference on Neural Networks (IJCNN) (2014) : 3205-3212 doi:10.1109/IJCNN.2014.6889847 |
abstract |
| Kerr et al. | Kerr, C.C., van Albada, S., Neymotin, S.A., Chadderdon, G.L., Robinson, P.A., and Lytton, W.W. | Cortical information flow in Parkinson's disease: a composite network/field model | Front Comput Neurosci. (2013) 7:39 doi:10.3389/fncom.2013.0003 |
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| Khoei et al. 2013 | Khoei, M.A., Masson, G.S. and Perrinet, L.U. | Motion-based prediction explains the role of tracking in motion extrapolation | Journal of Physiology (2013) 107: 409-420 doi:10.1016/j.jphysparis.2013.08.001 |
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| Kooijmans et al. 2014 | Kooijmans, R.N., Self,M.W., Wouterlood,F.G., Beliën, J.A.M. and Roelfsema P.R. | Inhibitory Interneuron Classes Express Complementary AMPA-Receptor Patterns in Macaque Primary Visual Cortex | The Journal of Neuroscience (2014) 34(18): 6303-6315 doi:10.1523/JNEUROSCI.3188-13.2014 |
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| Krishnamurthy et al. 2012 | Krishnamurthy, P., Silberberg, G. and Lansner, A. | A cortical attractor network with Martinotti cells driven by facilitating synapses | PLoS ONE (2012) 7(4): e30752 doi:10.1371/journal.pone.0030752 |
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| Kunkel et al. 2011 | Kunkel, S., Diesmann, M. and Morrison, A. | Limits to the Development of Feed-Forward Structures in Large Recurrent Neuronal Networks | Front. Comput. Neurosci. (2011) 4:160 doi:10.3389/fncom.2010.00160 |
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| Kunkel et al. 2011b | Kunkel, S., Potjans, T.C., Eppler, J.M., Plesser, H.E., Morrison, A. and Diesmann, M. | Meeting the memory challenges of brain-scale network simulation | Front. Neuroinform. (2011) 5:35 doi:10.3389/fninf.2011.00035 |
abstract |
| Kunkel et al. 2014 | Kunkel, S., Schmidt, M., Eppler, J.M., Plesser, H.E., Masumoto, G., Igarashi, J., Ishii, S., Fukai, T., Morrison, A., Diesmann, M. and Helias, M. | Spiking network simulation code for petascale computers | Front. Neuroinform. (2014) 8:78 doi:10.3389/fninf.2014.00078 |
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| Ledberg et al. 2012 | Ledberg, A., Montagnini, A., Coppola, R. and Bressler, S.L. | Reduced Variability of Ongoing and Evoked Cortical Activity Leads to Improved Behavioral Performance | PLoS ONE (2012) 7: e43166 doi:10.1371/journal.pone.0043166 |
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| Lundqvist et al. 2011a | Lundqvist, M., Herman, P. and Lansner, A. | Theta and gamma power increases and alpha/beta power decreases with memory load in an attractor network model | J Cogn Neurosci (2011) 23:3008-3020 doi:10.1162/jocn_a_00029 |
abstract |
| Lundqvist et al. 2012 | Lundqvist, M., Herman, P. and Lansner, A. | Variability of spike firing during theta-coupled replay of memories in a simulated attractor network | Brain Res (2012) 1434:152-161 doi:10.1016/j.brainres.2011.07.055 |
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| Meli and Lansner 2013 | Meli, C. and Lansner, A. | A modular attractor associative memory with patchy connectivity and weight pruning | Network: Computation in Neural Systems (2013) 24(4):129-150 doi:10.3109/0954898X.2013.859323 |
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| Milekovic et al. 2015 | Milekovic, T., Truccolo, W., Grün, S., Riehle, A. and Brochier, T. | Local field potentials in primate motor cortex encode grasp kinetic parameters | Neuroimage (2015) 114: 338-355 doi:10.1016/j.neuroimage.2015.04.008 |
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| Muller and Destexhe 2012 | Muller, L. and Destexhe, A. | Propagating waves in thalamus, cortex and the thalamocortical system: Experiments and models | Journal of Physiology-Paris (2012) 106 (5-6): 222-238 doi:10.1016/j.jphysparis.2012.06.005 |
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| Muller et al. 2014 | Muller, L.E., Reynaud, A., Chavane, F. and Destexhe, A. | The stimulus-evoked population response in visual cortex of awake monkey is a propagating wave | Nature Communications (2014) 5: 3675 doi:10.1038/ncomms4675 |
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| Muller et al. 2014b | Muller, L.E., Destexhe, A. and Rudolph-Lilith, M. | Brain networks: small-worlds, after all? | New Journal of Physics (2014) 16: 105004 doi:10.1088/1367-2630/16/10/105004 |
abstract, fulltext |
| Navaridasa et al. 2013 | Navaridasa, J., Furbera, S., Garsidea, J., Jinb, X., Khanc, M., Lestera, D., Lujã¡na, M., Miguel-Alonsod, J., Painkrasa, E., Pattersona, C., Planaa, L. A., Rasta, A., Richardsa, D., Shib, Y., Templea, S., Wue, J. and Yangf, S. | SpiNNaker: Fault tolerance in a power- and area- constrained large-scale neuromimetic architecture | Parallel Computing (2013) 39(11): 693-708 doi:10.1016/j.parco.2013.09.001 |
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| Perrinet and Bednar 2015 | Perrinet, L.U., Bednar, J.A. | Edge co-occurrences can account for rapid categorization of natural versus animal images | Scientific Reports (2015) 5: 11400 doi:10.1038/srep11400 |
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| Perrinet et al. 2014 | Perrinet, L.U., Adams, R.A. and Friston, K.J. | Active inference, eye movements and oculomotor delays | in Biological Cybernetics (2014) 108(6):777-801 doi:10.1007/s00422-014-0620-8 |
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| Petrovici et al. 2014 | Petrovici, M. A., Vogginger, B., Müller, P., Breitwieser, O., Lundqvist, M., Muller, L., Ehrlich, M., Destexhe, A., Lansner, A., Schüffny, R., Schemmel, J. and Meier, K. | Characterization and Compensation of Network-Level Anomalies in Mixed-Signal Neuromorphic Modeling Platforms | PLoS ONE (2014) 9(10): e108590 doi:10.1371/journal.pone.0108590 |
abstract |
| Peyrache et al. 2011 | Peyrache, A., Battaglia, F. and Destexhe, A. | Inhibition recruitment in prefrontal cortex during sleep spindles and gating of hippocampal inputs | PNAS (2011) 108(41): 17207-17212 doi:10.1073/pnas.1103612108 |
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| Peyrache et al. 2012 | Peyrache, A., Dehghani, N., Eskandar, E.N., Madsen, J.R., Anderson, W.S., Donoghue, J.S., Hochberg, L.R., Halgren, E., Cash, S.S., and Destexhe, A. | Spatiotemporal dynamics of neocortical excitation and inhibition during human sleep | PNAS (2012) 109 (5): 1731-1736 doi:10.1073/pnas.1109895109 |
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| Pfeil et al. 2012 | Pfeil, T., Grübl, A., Jeltsch, S., Müller, E., Müller, P., Petrovici, M., Schmuker, M., Brüderle, D., Schemmel, J. and Meier, K. | Six networks on a universal neuromorphic computing substrate | Front. Neurosci. (2013) 7:11 (Pre-print: http://arxiv.org/abs/1210.7083) doi:10.3389/fnins.2013.00011 |
abstract |
| Pinotsis et al. 2013 | Pinotsis, D.A., Hansen, E., Friston, K.J. and Jirsa, V.K. | Anatomical connectivity and the resting state activity of large cortical networks | Neuroimage (2013) 65:127-38 doi:10.1016/j.neuroimage.2012.10.016 |
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| Pooresmaeili and Roelfsema 2014 | Pooresmaeili, A. and Roelfsema, P. R. | A Growth-Cone Model for the Spread of Object-Based Attention during Contour Grouping | Current Biology (2014) 24(24): 2869-2877 doi:10.1016/j.cub.2014.10.007 |
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| Pooresmaeili et al. 2014 | Pooresmaeili, A., Poort, and Roelfsema, P.R. | Simultaneous selection by object-based attention in visual and frontal cortex | PNAS (2014) 111(17): 6467-6472 doi:10.1073/pnas.1316181111 |
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| Poort et al. 2012 | Poort, J., Raudies, F., Wannig, A., Lamme, V.A.F., Neumann, H. and Roelfsema, P.R. | The role of attention in figure-ground segregation in areas V1 and V4 of the visual cortex. | Neuron (2012) 75: 143-156 doi:10.1016/j.neuron.2012.04.032 |
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| Potjans et al. 2011b | Potjans, W., Diesmann, M. and Morrison, A. | An Imperfect Dopaminergic Error Signal Can Drive Temporal-Difference Learning | PLoS Comput Biol. (2011) 7(5): e1001133 doi:10.1371/journal.pcbi.1001133 |
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| Probst et al. 2015 | Probst, D., Petrovici, M. A., Bytschok, I., Bill, J., Pecevski, D., Schemmel, J. and Meier, K. | Probabilistic inference in discrete spaces can be implemented into networks of LIF neurons | Front. Comput. Neurosci. (2015) 9:13 doi:10.3389/fncom.2015.00013 |
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| Rankin et al. 2013b | Rankin, J., Meso, A. I., Masson, G.S., Faugeras, O. and Kornprobst, P. | Bifurcation study of a neural field competition model with an application to perceptual switching in motion integration | Journal of Computational Neuroscience (2013) September: 1-21 doi:10.1007/s10827-013-0465-5 |
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| Reig et al. 2015 | Reig, R., Zerlaut, Y., Vergara, R., Destexhe, A. and Sanchez-Vives, M. | Gain modulation of synaptic inputs by network state in auditory cortex in vivo | Journal of Neuroscience (2015) 35: 2689-2702 doi:10.1523/JNEUROSCI.2004-14.2015 |
abstract |
| Reynaud et al. 2012 | Reynaud, A., Masson, G. S. and Chavane, F. | Dynamics of Local Input Normalization Result from Balanced Short- and Long-Range Intracortical Interactions in Area V1 | The Journal of Neuroscience (2012) 32(36):12558 - 12569 doi:10.1523/JNEUROSCI.1618-12.2012 |
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| Riehle et al. 2013 | Riehle, A., Wirtssohn, S., Grün, S. and Brochier, T. | Mapping the spatio-temporal structure of motor cortical LFP and spiking activities during reach-to-grasp movements | Front. Neural Circuits (2013) 7:48 doi:10.3389/fncir.2013.00048 |
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| Santamaria-Garcia et al. 2013 | Santamaria-Garcia, H., Pannunzi, M., Ayneto, A., Deco, G., Sebastian-Galles, N. | 'If you are good, I get better': the role of social hierarchy in perceptual decision-making | Soc. Cogn. Affect. Neurosci. (1014) 9(10):1489-1497 doi:10.1093/scan/nst133 |
abstract, (fulltext) |
| Schain et al. 2013 | Schain, M., Benjaminsson, S., Varnäs, K., Forsberg, A., Halldin, C., Lansner, A., Farde, L. and Varrone, A. | Arterial input function derived from pairwise correlations between PET-image voxels | J Cereb Blood Flow Metab (2013) 33:1058-1065 doi:10.1038/jcbfm.2013.47 |
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| Self et al. 2014 | Self, M.W., Lorteije, J.A.M., Vangeneugden, J., van Beest, E.H., Grigore, M.E., Levelt, C., Heimel, J.A. and Roelfsema, P.R. | Orientation-Tuned Surround Suppression in Mouse Visual Cortex | The Journal of Neuroscience (2014) 34(28): 9290-9304 doi:10.1523/JNEUROSCI.5051-13.2014 |
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| Silverstein and Lansner 2011 | Silverstein, D.N. and Lansner, A. | Is Attentional Blink a Byproduct of Neocortical Attractors? | Front Comput Neurosci. (2011) 5: 13 doi:10.3389/fncom.2011.00013 |
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| Simoncini et al. 2012 | Simoncini, C., Perrinet, L.U., Montagnini, A., Mamassian, P. and Masson G.S. | More is not always better: pooling motion information differently for perception or action | Nature Neuroscience (2012) 15: 1596-1603 doi:10.1038/nn.3229 |
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| Takerkart et al. 2014 | Takerkart, S., Katz, P., Garcia, F., Roux, S., Reynaud, A. and Chavane, F. | Vobi One: a data processing software package for functional optical imaging. | Front. Neurosci. (2014) 8:2 doi:10.3389/fnins.2014.00002 |
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| Tauste Campo et al. 2015 | Tauste Campo, A., Martinez-Garcia, M., Nacher, V., Luna, R., Romo, R. and Deco, G. | Task-driven intra- and interarea communications in primate cerebral cortex | Proc. Natl. Acad. Sci. USA (2015) 112(15):4761-4766 doi:10.1073/pnas.1503937112 |
abstract |
| Tully et al. 2014 | Tully, P. J., Hennig, M. H. and Lansner, A. | Synaptic and Nonsynaptic Plasticity Approximating Probabilistic Inference | Front. Synaptic Neurosci. (2014) 6:8 doi:10.3389/fnsyn.2014.00008 |
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| van Kerkoerle et al. 2014 | van Kerkoerle, T., Self, M.W., Dagnino, B., Gariel-Mathis, M.-A., Poort, J., van der Togt, C. and Roelfsema, P.R. | Alpha and gamma oscillations characterize feedback and feedforward processing in monkey visual cortex | PNAS (2014) 111(40): 14332-14341 doi:10.1073/pnas.1402773111 |
abstract, fulltext |
| Vasquez et al. 2012 | Vasquez, J.-C., Palacios, A., Marre, O., Berry II, M. J. and Cessac, B. | Gibbs distribution analysis of temporal correlations structure in retina ganglion cells | J. Physiol. Paris (2012) 106(4):120-127 doi:10.1016/j.jphysparis.2011.11.001 |
(fulltext), BibTeX |
| Vella et al. 2014 | Vella, M., Cannon, R.C., Crook, S., Davison, A.P., Ganapathy, G., Robinson, H.P.C., Silver, R.A. and Gleeson, P. | libNeuroML and PyLEMS: using Python to combine procedural and declarative modelling approaches in computational neuroscience | Frontiers in Neuroinformatics (2014) 8: 38 doi:10.3389/fninf.2014.00038 |
abstract |
| Vogels et al 2013 | T. P. Vogels, R. C. Froemke, N. Doyon, M. Gilson, J. S. Haas, R. Liu, A. Maffei, P. Miller, C. J. Wierenga, M. A. Woodin, F. Zenke and H. Sprekeler | Inhibitory synaptic plasticity: spike timing-dependence and putative network function | Frontiers In Neural Circuits (2013) : 7 doi:10.3389/fncir.2013.00119 |
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| Vogginger et al. 2015 | Vogginger, B., Schüffny, R., Lansner, A., Cederström, L., Partzsch, J. and Höppner, S. | Reducing the computational footprint for real-time BCPNN learning | Front. Neurosci. (2015) 9:2 doi:10.3389/fnins.2015.00002 |
abstract, fulltext |
Review
| Crook et al. 2012 | Crook, S. M., Bednar, J. A., Berger, S., Cannon, R., Davison, A. P., Djurfeldt, M., Eppler, J., Kriener, B., Furber, S., Graham, B., Plesser, H. E., Schwabe, L., Smith, L., Steuber, V. and van Albada, S. | Creating, documenting and sharing network models | Network: Computation in Neural Systems (2012) 23(4): 131-149 doi:10.3109/0954898X.2012.722743 |
abstract, fulltext |
Book chapter
| Bedard and Destexhe 2014 | Bedard, C. and Destexhe, A. | Local Field Potential: Interaction with the extracellular medium. In: Encyclopedia of Computational Neuroscience | In: Encyclopedia of Computational Neuroscience, Edited by Jaeger D and Jung R. Springer, New York, (2014): 1-10 | abstract |
| Bedard and Destexhe in press | Bedard, C. and Destexhe, A. | Modeling local field potentials and their interaction with the extracellular medium | in: Handbook of Neural Activity Measurement, Edited by Brette, R. and Destexhe, A., Cambridge University Press, Cambridge, UK, ISBN:9780521516228 |
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| Cessac and Palacios 2012 | Cessac, B. and Palacios, A. | Spike train statistics from empirical facts to theory: the case of the retina | Modeling in Computational Biology and Biomedicine: A Multidisciplinary Endeavor, Springer-Verlag (2012) | fulltext, BibTeX |
| Crook et al. 2013 | Crook., S. M., Davison, A. P. and Plesser, H. E. | Learning from the past: approaches for reproducibility in computational neuroscience | In: J.M. Bower (Ed.), 20 Years of Computational Neuroscience, Springer, ISBN 978-1-4614-1423-0 doi:10.1007/978-1-4614-1424-7_4 |
abstract |
| Davison et al. 2014 | Davison, A.P., Mattioni, M., Samarkanov, D. and Telenczuk, B. | Sumatra: A Toolkit for Reproducible Research | In: Implementing Reproducible Research (2014), edited by V. Stodden, F. Leisch and R.D. Peng, Chapman & Hall/CRC: Boca Raton, Florida., pp. 57-79 | abstract |
| Destexhe 2013 | Destexhe, A. | 20 Years of "Noise": Contributions of Computational Neuroscience to the Exploration of the Effect of Background Activity on Central Neurons | In: 20 Years of Computational Neuroscience Springer Series in Computational Neuroscience (2013) 9: 167-186 doi:10.1007/978-1-4614-1424-7_8 |
abstract |
| Destexhe and Rudolph-Lilith 2014 | Destexhe, A. and Rudolph-Lilith, M. | Noisy dendrites: Models of dendritic integration in vivo. | In: The Computing Dendrite, Edited by Cuntz, H., Remme, M.W.H. and Torben-Nielsen, B., Springer, New York, pp. 173-190, 2014, ISBN 978-1-4614-8093-8 | abstract |
| Devor et al. 2012 | Devor, A., Boas, D.A., Einevoll, G.T., Buxton, R.B. and Dale, A.M. | Neuronal Basis of Non-Invasive Functional Imaging: From Microscopic Neurovascular Dynamics to BOLD fMRI | Advances in Neurobiology (2012) 4: 433-500 doi:10.1007/978-1-4614-1788-0_15 |
abstract |
| Lansner and Diesmann 2012 | Lansner, A. and Diesmann, M. | Virtues, Pitfalls, and Methodology of Neuronal Network Modeling and Simulations on Supercomputers | Computational Systems Neurobiology, Editors N. Le Novère, ISBN: 978-94-007-3857-7 (Print) 978-94-007-3858-4 (Online) (2012): 283-315 | abstract |
| Pettersen et al. 2012 | Pettersen, K.H., Linden, H., Dale, A.M. and Einevoll, G.T. | Extracellular spikes and CSD | Handbook of Neural Activity Measurement, edited by R. Brette and A. Destexhe, Cambridge, 2012: 92-135 Book URL: http://www.cambridge.org/gb/knowledge/isbn/item6698760/?site_locale=en_GB |
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| Pettersen et al. 2013 | Pettersen, K. H., Linden, H., Dale, A.M. and Einevoll, G. T. | Extracellular spikes and current-source density | in Handbook of Neural Activity Measurement, edited by Romain Brette and Alain Destexhe, ISBN: 9780521516228, Published September 2012 | fulltext |
Conference contribution: talk
| Davison 2011 | Davison, A. | Using PyNN and NineML | Talk at CNS*2011 Workshop: Emerging standards for network modeling | |
| Davison 2013 | Davison, A. | Provenance tracking for complex data analysis workflows in neuroscience | 10th Göttingen Meeting of the German Neuroscience Society, Göttingen, Germany, March (2013). | |
| Davison 2013b | Davison, A. | PyNN: a simulator-independent platform for large scale, data-driven neuronal simulations | Cosyne workshops, Snowbird, Utah, USA, March (2013) | |
| Denker et al. 2012b | Denker, M., Zehl, L., Brochier, T., Grün, S., Riehle, A. | Comparing the spatio-temporal organization of joint spiking and local field potential oscillations in motor cortex | Twenty First Annual Computational Neuroscience Meeting: CNS*2012, Decatur, GA, USA; BMC Neuroscience 2012, 13(Suppl 1):P127 doi:10.1186/1471-2202-13-S1-P127 |
abstract |
| Denker et al. 2014 | Denker, M., Abrams, M., Wachtler, T., Davison, A. and Grün, S. | INCF workshop report: New perspectives on workflows and data management for the analysis of electrophysiological data. | Neuroinformatics 2014, Leiden, Netherlands, 08/25/2014 - 08/27/2014 doi:10.3389/conf.fninf.2014.18.00021 |
abstract |
| Denker et al. 2014b | Denker, M., Zehl, L., Yegenoglu, A., Wachtler, T., Davison, A. and Grün, S. | Improving Workflows and Data Management for the Analysis of Electrophysiological Data | Advances in Neuroinformatics 2014, AINI2014, Wako-shi, Japan, 09/25/2014 - 09/26/2014 | |
| Destexhe 2013b | Destexhe, A. | How to reconcile macroscopic brain signals with neuronal unit activity? | Dynamics of Neuronal Systems, Freiburg, Germany. March (2013). (Invited speaker) | |
| Destexhe 2013c | Destexhe, A. | Frequency scaling of human and monkey LFP | Scale-Free Dynamics and Networks in Neurosciences, Montreal, Canada (2013) (Invited speaker) | |
| Helias et al. 2014a | Helias, M., Kunkel, S., Morrison, A. and Diesmann, M. | NEST, simulation technology for brain-scale networks at cellular and synaptic resolution | SOS18 Conference on distributed supercomputing, St. Moritz, Switzerland, 03/17/2014 - 03/20/2014 | |
| Kunkel et al. 2014c | Kunkel, S., Helias, M., Diesmann, M. and Morrison, A. | Specifying supercomputers for brain-scale neuronal network simulations | HPC for Life Science, Brussels, Belgium, 05/26/2014 - 05/27/2014 | |
| Kunkel et al. 2014d | Kunkel, S., Helias, M., Diesmann, M. and Morrison, A. | Supercomputer simulations of spiking neuronal networks | Progress on Brain-Like Computing, Stockholm, Sweden, 02/05/2014 - 02/06/2014 | |
| Maximov2013 | Maximov, A. | Toward a large-scale spiking network model of the rodent barrel cortex | 3rd BrainScaleS Plenary Meeting, Marseille, France, 03/21/2013 - 03/22/2013 |
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| Rast et al. 2013 | Rast, A., Partzsch, J., Mayr, C., Schemmel, J., Hartmann, S., Plana, L., Temple, S., Lester, D., Schueffny, R., Furber, S. | A Location-Independent Direct Link Neuromorphic Interface | International Joint Conference on Neural Networks (2013) doi:10.1109/IJCNN.2013.6706887 |
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| Schemmel et al. 2012a | Schemmel, J. and Grübl, A. and Kononov, A. and Meier, K. and Millner, S. and Schwartz, M. and Scholze, S. and Schiefer, S. and Hartmann, S. and Partzsch, J. and Mayr, C. and Schüffny, R. | Live Demonstration: A Scaled-Down Version of the BrainScaleS Wafer-Scale Neuromorphic System | IEEE International Symposium on Circuits and Systems 2012 | |
| Tauste Campo et al. 2014 | Tauste Campo, A., Martinez Garcia, M., Nacher, R., Romo, R. and Deco, G. | Causal correlation paths across cortical areas in decision making | BMC Neuroscience (2014) 15(Suppl. 1): O7 doi:10.1186/1471-2202-15-S1-O7 |
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Conference contribution: poster
| Antolik and Davison 2013b | Antolik, J. and Davison, A.P. | Mozaik: a framework for model construction, simulation, data analysis and visualization for large-scale spiking neural circuit models | Neuroinformatics 2013, Stockholm, Sweden, August (2013) doi:10.3389/conf.fninf.2013.09.00018 |
abstract |
| Bachmannet al 2013 | Bachmann, C. ; Tetzlaff, T. ; Kunkel, S. ; Bamberger, P. ; Morrison, A. | Computational characteristics of recurrent neural networks under the influence of Alzheimer's disease | 10th Göttingen Meeting of the German Neuroscience Society, Göttingen, Germany, 03/13/2013 - 03/16/2013 |
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| Bachmannet al 2013b | Bachmann, C., Tetzlaff, T., Kunkel, S., Bamberger, P. and Morrison, A. | Effect of Alzheimer's disease on the dynamical and computational characteristics of recurrent neural networks | 22nd Annual Computational Neuroscience Meeting, CNS*2013, Paris, France, 07/13/2013 - 07/18/2013 |
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| Bachmannet al 2015 | Bachmann, C. ; Tetzlaff, T. ; Kunkel, S. ; Morrison, A. | Effect of Alzheimer disease on the dynamical and computational characteristics of recurrent neural networks | 11th Göttingen Meeting of the German Neuroscience Society, Göttingen, Germany, 03/18/2015 - 03/28/2015 | |
| Bakkeret al 2012 | Bakker, R. ; Denker, M. ; Diesmann, M. ; Eppler, J. M. ; Grün, S. ; Grytskyy, D. ; Helias, M. ; Ito, J. ; Maximov, A. ; Schmidt, M. ; Tetzlaff, T. ; Torre, E. ; van Albada, S. ; Wiebelt, B. ; Zehl, L. | Planned activities in Jülich | BrainScales Conference, Jülich, Germany, 03/19/2012 |
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| Benjaminsson and Lansner 2011 | Benjaminsson, S. and Lansner, A. | Extreme Scaling of Brain Simulations | Jülich Blue Gene/P Extreme Scaling Workshop 2011, Technical Report FZJ-JSC-IB-2011-02 available from http://www2.fz-juelich.de/jsc/docs/autoren2011/mohr1/ | |
| Bogadhi et al. 2011 | Bogadhi, A., Montagnini, A. and Masson, G.S. | Dynamical interaction between retinal and extra-retinal signals in motion integration for smooth pursuit | Journal of Vision (2011) 11(11): article 533 doi:10.1167/11.11.533 |
abstract |
| Chavane et al. 2012a | Chavane, F., Reynaud, A., Montardy, Q. and Masson G. S. | Cortical origin of contextual modulations in motion integration: linking V1 population response to the behavioral ocular following response | Journal of Vision August (2012) 12(9): 758 doi:10.1167/12.9.758 |
abstract |
| Davison 2011b | Davison, A. | Collaborative and reproducible simulation and data analysis with Sumatra | Front. Neuroinform. Conference Abstract: 4th INCF Congress of Neuroinformatics doi:10.3389/conf.fninf.2011.08.00079 |
abstract |
| Davison 2011c | Davison, A. | Automated tracking of scientific computations | AMP 2011: Reproducible Research-Tools and Strategies for Scientific Computing, Vancouver, Canada, July 2011 | |
| Davison et al. 2013 | Davison, A.P., Djurfeldt, M., Eppler, J.M., Gleeson, P., Hull, M. and Muller, E.B. | An integration layer for neural simulation: PyNN in the software forest | Neuroinformatics 2013, Stockholm, Sweden, August (2013). doi:10.3389/conf.fninf.2013.09.00020 |
abstract |
| Davison et al. 2013b | Davison, A.P., Brizzi, T., Guarino, D., Manette, O.F., Monier, C., Sadoc, G. and Frégnac, Y. | Helmholtz: a customizable framework for neurophysiology data management | Neuroinformatics 2013, Stockholm, Sweden, 27 Aug - 29 Aug, (2013) doi:10.3389/conf.fninf.2013.09.00025 |
abstract |
| Dehghani et al. 2011 | Dehghani, N., Peyrache, A., Eskandar, E., Madsen, J., Anderson, W., Donoghue, J., Halgren, E., Destexhe, A. and Cash, S. | Relationship between excitatory and inhibitory neuronal activity and local field potentials during human sleep. | Soc Neurosci Abstracts 37: 451.05 | |
| Denker et al. 2011a | Denker, M., Davison, A., Grün, S. and Diesmann, M. | How collaborative projects that involve complicated electrophysiological data sets profit from workflow design | Poster at the 4th INCF Congress of Neuroinformatics, Boston, USA doi:10.3389/conf.fninf.2011.08.00080 |
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| Denker et al. 2011b | Denker, M., Davison, A., Grün, S. and Diesmann, M. | Towards guiding principles in workflow design to facilitate collaborative projects involving massively parallel electrophysiological data | BMC Neuroscience 2011, 12(Suppl 1):P131 doi:10.1186/1471-2202-12-S1-P131 |
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| Denker et al. 2011d | Denker, M., Wirtssohn, S., Brochier, T., Grün, S. and Riehle, A. | Mapping the synchronization structure of LFP activity in motor cortex | Poster at the Ninth Göttingen Meeting of the German Neuroscience Society 2011: T21-9B | abstract |
| Denker et al. 2011e | Denker, M., Brochier, T., Grün, S. and Riehle, A. | Spatial synchronization structure of field potentials and spikes in a delayed grip task | Front. Comput. Neurosci. (2011) Conference Abstract: BC11 : Computational Neuroscience & Neurotechnology Bernstein Conference & Neurex Annual Meeting 2011 doi:10.3389/conf.fncom.2011.53.00103 |
abstract |
| Denker et al. 2012 | Denker, M., Zehl, L., Brochier, T., Riehle, A. and Grün, S. | Spatial organization of joint spiking and local field potential coherence in motor cortex. | Poster contribution at conference Neurovisionen 8; Aachen, Germany; 10/26/2012. | |
| Denker et al. 2012c | Denker, M., Zehl, L., Brochier, T., Grün, S., Riehle, A. | Spatial organization of synchronized activity expressed by joint spiking and local field potentials in motor cortex | 8th FENS Forum of European Neuroscience 2012, Barcelona, Spain |
abstract |
| Denker et al. 2014a | Zehl, L., Kilavik, B., Diesmann, M., Brochier, T., Riehle, A. and Grün, S. | Characterizing spatially organized LFP beta oscillations in the macaque motor cortex | AREADNE 2014, Santorini, Greece, 06/25/2014 - 06/29/2014 | |
| Denker et al. 2015 | Denker, M., Yegenoglu, A., Holstein, D., Torre, E., Jennings, T., Davison, A. and Grün, S. | elephant: An open-source tool for the analysis of electrophysiological data | Proceedings of the 11th Meeting of the German Neuroscience Society, Neuroforum (2015) T27-2B | |
| Denkeret al 2013 | Denker, M. ; Riehle, A. ; Diesmann, M. ; Grün, S. | Relating excess spike synchrony to LFP-locked firing rate modulations. | Annual CNS Meeting 2013, Paris, France, 07/13/2013 - 07/18/2013 |
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| Eppler et al. 2011 | Eppler, J.M., Kunkel, S., Plesser, H.E., Gewaltig, M.-O., Morrison, A. and Diesmann, M. | NEST: An efficient simulator for spiking neural network models | Poster at the Ninth Göttingen Meeting of the German Neuroscience Society 2011: T27-9B | abstract |
| Eppler et al. 2012 | Eppler, J. M., Djurfeldt, M., Muller, E., Diesmann, M. and Davison, A. | Combining simulator independent network descriptions with run-time interoperability based on PyNN and MUSIC | In Conference Abstract: 5th INCF Congress of Neuroinformatics, Front. Neuroinform. (2012) | |
| EpplerM et al 2013 | Eppler, J. M. ; Kunkel, S. ; Helias, M. ; Zaytsev, Y. ; Plesser, H. E. ; Gewaltig, M.-O. ; Morrison, A. ; Diesmann, M. | 20 years of NEST: a mature brain simulator | INM Retreat 2013, Jülich, Germany, 07/02/2013 - 07/03/2013 |
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| Galluppi et al. 2012 | Galluppi, F., Davies, S., Rast, A., Sharp, T., Plana, L. A. and Furber, S. | A hierachical configuration system for a massively parallel neural hardware platform | CF '12 Proceedings of the 9th conference on Computing Frontiers, Cagliari (2012): 183-192 doi:10.1145/2212908.2212934 |
abstract, fulltext |
| Gorchetchnikov et al. 2011 | Gorchetchnikov, A., Cannon, R., Clewley, R., Cornelis, H., Davison, A., De Schutter, E., Djurfeldt, M., Gleeson, P., Hill, S., Hines, M., Kriener, B., Le Franc, Y., Lo, C.-C., Morrison, A., Muller, E., Plesser, H.E., Raikov, I., Ray, S., Schwabe, L. and Szatmary, B. | NineML: declarative, mathematically-explicit descriptions of spiking neuronal networks | Front. Neuroinform. Conference Abstract: 4th INCF Congress of Neuroinformatics doi:10.3389/conf.fninf.2011.08.00098 |
abstract |
| Helias et al. 2012a | Helias, M., Kunkel, S., Eppler, J., Masumoto, G., Igarashi, J., Ishii, S., Fukai, T., Morrison, A. and Diesmann, M. | Spiking neuronal network simulation technology for contemporary supercomputers | INCF Meeting, 10-12 Sept 2012, Munich, Germany | |
| Jordanet al 2015 | Jordan, J. ; Pfeil, T. ; Tetzlaff, T. ; Grübl, A. ; Schemmel, J. ; Diesmann, M. ; Meier, K. | The effect of heterogeneity on decorrelation mechanisms in spiking neural networks: a neuromorphic-hardware study | 11th Göttingen Meeting of the German Neuroscience Society, Göttingen, Germany, 03/18/2015 - 03/21/2015 | |
| Jordanet al. 2014b | Jordan, J., Petrovici, M., Pfeil, T., Breitwieser, O., Bytschok, I., Bill, J., Gruebl, A., Schemmel, J., Meier, K., Diesmann, M. and Tetzlaff, T. | Neural Networks as Sources of uncorrelated Noise for functional neural Systems | OCCAM 2014, Osnabrueck, Germany, 05/07/2014 - 05/09/2014 | |
| Kunkel et al 2013 | S. Kunkel, M. Schmidt, J. M. Eppler, H. E. Plesser, J. Igarashi, G. Masumoto, T. Fukai, S. Ishii, A. Morrison, M. Diesmann, and M. Helias. | From laptops to supercomputers: a single highly scalable code base for spiking neuronal network simulations. | BMC Neuroscience (2013) 14(Suppl 1):P163 doi:10.1186/1471-2202-14-S1-P163 |
abstract |
| Kunkelet al 2013b | Kunkel, S. ; Schmidt, M. ; Eppler, J. M. ; Igarashi, J. ; Masumoto, G. ; Fukai, T. ; Ishii, S. ; Plesser, H. E. ; Morrison, A. ; Diesmann, M. ; Helias, M. | Supercomputers ready for use as discovery machines for neuroscience | 10th Meeting of the German Neuroscience Society, NWG 2013, Goettingen, Germany, 03/13/2013 - 03/18/2013 |
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| Maksimovet al 2012 | Maksimov, A. ; van Albada, S. J. ; Diesmann, M. | Understanding global whisker motion detection through large-scale simulation of the rodent whisker system | Okinawa Computational Neuroscience Course 2012 Okinawa, Japan, 2012-06-11" |
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| Martinez-Garcia et al. 2011b | Martinez-Garcia, M., Insabato, A., Pardo-Vazquez, J.L., Acuña, C. and Deco, G. | Neural correlates of confidence in decision-making | Poster at the ICON Congress, Palma de Mallorca, Spain, September 2011 | |
| Maximovet al 2013 | Maximov, A. ; van Albada, S. ; Diesmann, M. | Toward a biologically realistic spiking model of a rodent barrel column | Bernstein Conference 2013, Tuebingen, Germany, 09/25/2013 - 09/27/2013 |
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| Meso et al. 2013 | Meso, A., Rankin, J., Kornprobst, P. and Masson, G.S. | Multi-stability in motion perception combines multiple underlying neural mechanisms | CoSyne meeting. 1-4 March 2013, Salt-Lake City, USA. | |
| Millner et al. 2012 | Millner, S., Hartel, A., Schemmel, J. and Meier, K. | Towards biologically realistic multi-compartment neuron model emulation in analog VLSI | ESANN 2012 proceedings, European Symposium on Artificial Neural Networks, Computational Intelligence and Machine Learning. Bruges (Belgium), 25-27 April 2012 | fulltext |
| Montagnini et al. 2012 | Montagnini, A., Bogadhi, A. R. and Masson, G. S. | (2012) Dynamical integration of retinal and extra-retinal signals for smooth pursuit eye movements : a two stage bayesian model | Perception, ECVP Abstracts September 2012 | |
| Morrison et al. 2011 | Morrison, A., Denker, M., Wiebelt, B., Fliegner, D. and Diesmann, M. | New possibilities for advanced analysis methods in neuroscience through modern approaches to trivial parallel data processing | Poster at the Ninth Göttingen Meeting of the German Neuroscience Society 2011: T27-11B | abstract |
| Partzsch et al. 2013 | Partzsch, J., Mayr, C., Vogginger, B., Schueffny, R., Rast, A., Plana, L., Furber, S. | Live Demonstration: Ethernet Communication Linking Two Large-Scale Neuromorphic Systems | European Conference on Circuit Theory and Design (2013) doi:10.1109/ECCTD.2013.6662196 |
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| Peyrache et al. 2011b | Peyrache, A., Dehghani, N., Eskandar, E., Madsen, J., Anderson, W., Donoghue, J., Halgren, E., Cash, S.S. and Destexhe, A. | Spatio-temporal dynamics of neocortical excitation and inhibition during human sleep. | Soc Neurosci Abstracts 36: 451.06 | |
| Pfeil el al. 2013 | Pfeil, T., Scherzer, A.-C., Schemmel, J. and Meier, K. | Neuromorphic learning towards nano second precision | Neural Networks (IJCNN), The 2013 International Joint Conference on (2013): 1-5 doi:10.1109/IJCNN.2013.6706828 |
abstract, fulltext |
| Pfeilet al 2014 | Pfeil, T., Jordan, J., Tetzlaff, T., Grübl, A., Schemmel, J., Diesmann, M. and Meier, K. | Decorrelation of neural-network activity on heterogeneous neuromorphic hardware | 10th Bernstein Conference 2014, Goettingen, Goettingen, Germany, 09/02/2014 - 09/05/2014 doi:10.12751/nncn.bc2014.0221 |
abstract |
| Plesser et al. 2011 | Plesser, H.E., Crook, S. and Davison, A.P. | Reproducible models and reliable simulations: Current trends in computational neuroscience | SIAM Computational Science and Engineering 2011, Reno, Nevada, February 2011 | |
| Potjans et al. 2011 | Potjans, T.C., Kunkel, S., Morrison, A., Plesser, H.E. and Diesmann, M. | Beyond local cortical network modeling: linking microscopic and macroscopic connectivity in brainscale simulations | Poster at the Ninth Göttingen Meeting of the German Neuroscience Society 2011: T26-6A | abstract |
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| Tauste et al. 2013 | Tauste, A., Martinez-Garcia, M. and Romo, R. | Estimation of directed information between simultaneous spike trains in decision making | Workshop "New approaches to spike train analysis and neuronal coding", Computational Neuroscience Meeting, Paris, 2013. | |
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abstract |
| Van Albadaet al 2013 | van Albada, S. ; Maximov, A. ; Schmidt, M. ; Bakker, R. ; Schrader, S. ; Lester, D. ; Diesmann, M. | Cortical multi-layer models for down-scaled implementation on neuromorphic hardware and full-scale implementation on supercomputers | 3rd BrainScaleS plenary meeting, Marseille, France, 03/21/2013 - 03/22/2013 |
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| Wirtssohn et al. 2011 | Wirtssohn, S., Brochier, T., Denker, M., Grün, S. and Riehle, A. | Mapping the spatial structure of LFP activity in motor cortex | Poster at the Ninth Göttingen Meeting of the German Neuroscience Society 2011: T21-8B | abstract |
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| Zehl et al. 2013 | Zehl, L. ; Brochier, T. ; Riehle, A. ; Grün, S. ; Denker, M. | Spatio-temporal organization of local field potential oscillations in the monkey motor cortex | 10th Göttingen Meeting of the German Neuroscience Society, NWG2013, Göttingen, Germany, 03/13/2013 - 03/16/2013 |
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| Zehl et al. 2014b | Zehl, L., Denker, M., Stoewer, A., Jaillet, F., Brochier, T., Riehle, A., Wachtler, T. and Grün, S. | Metadata management for complex neurophysiological experiments | AREADNE 2014, Santorini, Greece, 06/25/2014 - 06/29/2014 | |
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Web publication (reviewed)
| Destexhe and Bedard 2013 | Destexhe, A. and Bedard, C. | Local field potential | Alain Destexhe and Claude Bedard (2013), Scholarpedia, 8(8):10713 doi:10.4249/scholarpedia.10713 |
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Master/Diploma Thesis
| Kononov 2011 | Kononov, A. | Testing of an Analog Neuromorphic Network Chip | Diploma thesis (2011) | abstract, fulltext |
Bachelor Thesis
| Friedrich 2015 | Friedrich, A. | Charakterisierung von Adaption auf neuromorpher Hardware | Bachelor thesis at University of Heidelberg (2015) | abstract, fulltext |
| Hornschild 2014 | Hornschild, A. | Neural computation with stochastic synapses | Bachelor thesis (2013) at RWTH Aachen University and Forschungszentrum Juelich GmbH |
Web publication
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Other
| Rehn, E., Benjaminsson, S. and Lansner, A. | Event-based Sensor Interface for Supercomputer scale Neural Networks | KTH technical report TRITA-CSC-CB, ISSN 1653-5707; 2012:02 | abstract, fulltext | |
| Bachmannet al. 2014 | Bachmann, C., Tetzlaff, T., Kunkel, S. and Morrison, A. | Effect of Alzheimer's disease on the dynamical and computational characteristics of recurrent neural networks | INM Retreat 2014, Juelich, Germany, 01/07/2014 - 02/07/2014 | |
| Bedard and Destexhe 2013b | Bedard, C. and Destexhe, A. | Letter to the editor: ELECTRIC MONOPOLES ARE INDEED COMPATIBLE WITH MAXWELL EQUATIONS | JN Physiol (2013) 109(6): 1683 doi:10.1152/jn.01095.2012 |
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| Denker et al. 2014d | Denker, M., Zehl, L., Kilavik, B., Diesmann, M., Brochier, T., Riehle, A. and Grün, S. | Characterizing Spatially Organized LFP Beta Oscillations in Motor Cortex | INM Retreat 2014, Jülich, Germany, 07/01/2014 - 07/02/2014 | |
| Jordan et al. 2014d | Jordan, J., Petrovici, M., Pfeil, T., Breitwieser, O., Bytschok, I., Bill, J., Gruebl, A., Schemmel, J., Meier, K., Diesmann, M. and Tetzlaff, T. | Neural networks as sources of uncorrelated noise for functional neural systems | 4th BrainScaleS Plenary meeting, Manchester, England, 03/20/2014 - 03/21/2014 | |
| Jordan et al. 2014e | Jordan, J., Petrovici, M., Pfeil, T., Bytschok, I., Bill, J., Gruebel, A., Meier, K., Diesmann, M. and Tetzlaff, T. | Neural networks as sources of uncorrelated noise for functional neural systems | 4th BrainScaleS Plenary meeting, Manchester, England, 03/20/2014 - 03/21/2014 | |
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